Site-directed spin labeling studies of sequence-dependent DNA shape and protein-DNA recognition 

A generalization of the accumulation curve in species sampling and its applications to high‐throughput sequencing 

Genome-wide studies of protein–DNA binding: beyond sequence towards biophysical and physicochemical models 

Understanding DNA methylation and nucleosome organization in cancer cells using single molecule sequencing 

Fast search and clustering for large-scale next generation sequencing data 

Genome-wide studies reveal the function and evolution of DNA shape 

Efficient short-read sequencing on long-read sequencers 

Non-parametric models for large capture-recapture experiments with applications to DNA sequencing 

Too many needles in this haystack: algorithms for the analysis of next generation sequence data 

Genetic characterization of microbial eukaryotic diversity and metabolic potential 

Sensing sequence-specific DNA micro-environment with nucleotide-independent nitroxides 

Profiling transcription factor-DNA binding specificity 

Techniques for de novo sequence assembly: algorithms and experimental results 

Quantitative modeling of in vivo transcription factor–DNA binding and beyond 

DNA shape at transcription factor binding sites: from purifying selection to a new alphabet 

The C3ORF37/SRAP1: a candidate tumor suppressor that promotes removal of methylated DNA 

Mechanistic basis for chromosomal translocations at the E2A gene 

Genome sequencing and transcriptome analysis of the phenotypically plastic spadefoot toads 

Decoding protein-DNA binding determinants mediated through DNA shape readout 

C. elegans topoisomerase II regulates chromatin architecture and DNA damage for germline genome activation 

Peripheral blood mononuclear cell capture and sequencing: optimization of a droplet based capture method and its applications 

Site-directed spin labeling studies of target DNA recognition by a CRISPR nuclease 

CpG poor promoter SULT1C2 regulated by DNA methylation and is induced by cigarette smoke condensate in lung cell lines 

Understanding protein–DNA recognition in the context of DNA methylation 

X-ray structural studies on DNA-dependent protein kinase catalytic subunit:DNA co-crystals