Grid workflow: A flexible framework for fault tolerance in the grid. - Page 26 |
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Following are two typical scientific applications in experimental study in structured biology and problem solving in linear system, respectively. The examples emphasize the coordinated and controlled used of multiple dedicated high-end computing resources when scientists performing their daily work to solve their domain-specific problems. • Scientists perform a series of tasks by acessing diverce types of computing resources to accomplish their scientific experiments: a remote instrumental device for 3-D raw data acquisition, one or more remote supercomputer(s) for reconstructed data acquisition from the raw data set, and a special-purpose graphics computer for visualization of the reconstructed data. Scientists need to acquire dedicated high-end computers and instruments in advance, and statically configure them for the experiments. • In order to solve large linear equation problems, researchers are required to do experimentation and testing with a sequence of computational steps such as analyzing the given matrix, applying a reordering or scaling transformation, selecting and applying a preconditional, and applying a solver among various alternatives. Each computation might be required to explicitly or transparently access remote numerical systems installed on specialized high-end computing resources. Note that the above examples are often called loosely coupled applications in following senses; first, no communication between activities/tasks (i.e., often called jobs in HPDC context) is required during the execution (i.e., message exchange between tasks occurs only during initialization and termination [102] of the tasks execution); second, there are no strict constraints on the component resources in terms of different programming 11 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission.
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Title | Grid workflow: A flexible framework for fault tolerance in the grid. - Page 26 |
Repository email | cisadmin@lib.usc.edu |
Full text | Following are two typical scientific applications in experimental study in structured biology and problem solving in linear system, respectively. The examples emphasize the coordinated and controlled used of multiple dedicated high-end computing resources when scientists performing their daily work to solve their domain-specific problems. • Scientists perform a series of tasks by acessing diverce types of computing resources to accomplish their scientific experiments: a remote instrumental device for 3-D raw data acquisition, one or more remote supercomputer(s) for reconstructed data acquisition from the raw data set, and a special-purpose graphics computer for visualization of the reconstructed data. Scientists need to acquire dedicated high-end computers and instruments in advance, and statically configure them for the experiments. • In order to solve large linear equation problems, researchers are required to do experimentation and testing with a sequence of computational steps such as analyzing the given matrix, applying a reordering or scaling transformation, selecting and applying a preconditional, and applying a solver among various alternatives. Each computation might be required to explicitly or transparently access remote numerical systems installed on specialized high-end computing resources. Note that the above examples are often called loosely coupled applications in following senses; first, no communication between activities/tasks (i.e., often called jobs in HPDC context) is required during the execution (i.e., message exchange between tasks occurs only during initialization and termination [102] of the tasks execution); second, there are no strict constraints on the component resources in terms of different programming 11 Reproduced with permission of the copyright owner. Further reproduction prohibited without permission. |